Meghan A. Duffy, Spencer R. Hall, Carla E. Cáceres, and Anthony R. Ives. 2009. Rapid evolution, seasonality, and the termination of parasite epidemics. Ecology 90:1441–1448.

Supplement

Matlab computer code and data for analyses of the full model give by Eq. 1.
Ecological Archives E090-095-S1.

Copyright

Authors
File list (downloads)
Description

Author(s)

Meghan A. Duffy
School of Biology
Georgia Institute of Technology
310 Ferst Drive
Atlanta, GA 30332-0230 USA
E-mail: duffy@gatech.edu

Spencer R. Hall
Department of Biology
Indiana University
1001 E. Third Street
Bloomington, IN 47405 USA
E-mail: sprhall@indiana.edu

Carla E. Cáceres
School of Integrative Biology
University of Illinois at Urbana-Champaign
Urbana, IL 61810 USA
E-mail: caceres@life.uiuc.edu

Anthony R. Ives
Department of Zoology
University of Wisconsin
Madison, WI 53706 USA
E-mail: arives@wisc.edu

File list

Duffy_et_al.m

Metschfig.m

MetschLLfunct.m

simanneal.m

UnsmoothedMetschDynamics.txt

Description

Duffy_et_al.m: main Matlab file; calls Metschfig.m, MetschLLfunct.m, and simanneal.m Together, these files provide the code for analyses of the full model given by Eq. 1. Matlab is produced by MathWorks (2007, MATLAB Version 7, MathWorks, Natick, Massachusetts, USA).

UnsmoothedMetschDynamics.txt: data file called by Duffy_et_al.m; this file contains data on lake/epidemic identity (column 1), Julian day (column 2), infection prevalence (column 3), D. dentifera density (column 4), susceptible density (column 5), infected density (column 6), weighted temperature (column 7), and epilimnion temperature (column 8).