Scott T. Woody, Anthony R. Ives, Erik V. Nordheim, and John H. Andrews. 2007. Dispersal, density dependence, and population dynamics of a fungal microbe on leaf surfaces. Ecology 88:1513–1524.

Supplement

Matlab computer code for analyses of experiment 1.
Ecological Archives E088-091-S1.

Copyright

Authors
File list (downloads)
Description

Author(s)

Anthony R. Ives
Department of Zoology
University of Wisconsin-Madison
Madison, WI 53706 USA
E-mail: arives@wisc.edu

File list

Woody_et_al_Expt1.m -- Main program.
expt1funct.m -- State-space model returning ln likelihoods.
expt1approxSEfunct.m -- Function to calculate approximate SE of parameter values.
woody826.txt -- Text file containing experimental data.
w826_912segs.txt -- Text file for estimates of segment-to-segment measurement error.
woody826meas.txt -- Text file containing segment standard errors.
estWoody_Expt1.txt -- Text file containing ML parameter estimates.
Woody_et_al_Expt1.zip -- All files together.

Description

The Woody_et_al_Expt1.m program in MatLab performs the state-space analysis of the experiment 1 as described in the Materials and Methods of the main article.  Woody_et_al_Expt1.m calls two programs, expt1funct.m and expt1approxSEfunct.m, and uses data from the text files.