Ecological Archives E091-063-A1

Ben L. Phillips, Crystal Kelehear, Lígia Pizzatto, Gregory P. Brown, Di Barton, and Richard Shine. 2010. Parasites and pathogens lag behind their host during periods of host range advance. Ecology 91:872–881.

Appendix A. Sampling localities, equilibrium simulations, and simulations with varying r.

Site Name

Latitude

Longitude

Sampling
episodes

Years
sampled

Total n

Mean prevalence
of Rhabdias (%)

2 Mile Creek, 48

-14.4289

132.3094

1

2007

7

100.0

46

-15.4311

131.4753

1

2007

2

100.0

47

-15.4922

131.3586

1

2007

2

100.0

51

-13.2786

131.1644

1

2007

10

0.0

53

-14.3349

132.1220

1

2007

1

100.0

55

-14.0655

131.9728

1

2007

2

50.0

57

-13.7295

131.7179

1

2007

5

0.0

Abergowrie

-18.4667

145.8833

1

1989

17

5.9

Adelaide River Township, ART

-13.1770

131.1700

1

2008

21

33.3

Bam Bam Springs, HSBBSHS

-13.3878

131.5073

1

2008

10

20.0

Beerboom Crossing, BBX

-13.8627

131.0754

1

2008

16

37.5

Bentley

-19.2610

146.8260

10

1990–1992

186

73.1

Bloomfield

-15.8500

145.3167

2

1989

52

1.9

Borroloola

-16.0680

136.3070

1

2006

31

87.1

Boyne island

-23.9333

151.3500

2

1989–1991

26

0.0

Brisbane

-27.4667

153.0167

1

1989

17

0.0

Bull Ck, O4

-13.8835

131.2777

1

2008

5

60.0

Cairns

-16.9220

145.7760

1

2006

30

80.0

Calvert Hills

-17.2167

137.3167

1

1989

72

0.0

CapeTribulation

-16.0167

145.4333

2

1990

13

0.0

CapeWeymouth

-12.6000

142.4333

2

1989

42

0.0

ChartersTowers

-20.0667

146.2500

1

1989

19

0.0

Closest swamp to Ooloo Crossing, O5

-14.0594

131.2565

1

2008

10

70.0

Coen

-13.9333

143.1833

1

1989

4

0.0

Copperfield Dam

-14.0400

131.9380

3

2008

31

45.2

Corroborree

-12.7692

131.4706

1

2008

16

37.5

Creek Crossing, Ooloo Rd, O6

-14.0058

131.0799

1

2008

10

60.0

Cullen, 56

-14.0040

131.9350

2

2007–2008

8

0.0

Darwin

-12.4620

130.8420

1

2008

33

0.0

Depot Ck

-13.6479

131.5476

1

2008

14

21.4

Dorat Road drainage line, DR3

-13.4808

132.4367

1

2008

9

0.0

Edith Falls

-14.1830

132.1830

1

2008

1

0.0

Edith Falls Rd

-14.1830

132.1830

1

2008

3

100.0

Elsey Creek, 24

-15.0107

133.3537

1

2007

5

100.0

First Ck inside Hot Springs National Park, O2

-13.7571

131.4331

1

2008

10

0.0

Flora River Rd, 43

-14.8519

131.5778

1

2007

6

50.0

From Edith Falls to Cullen

-14.0935

132.0590

1

2008

2

0.0

Greenant Ck, DR2

-13.5400

131.2493

1

2008

6

16.7

Hayes Ck Caravan Park, HCCP

-13.5838

131.4600

1

2008

12

33.3

Hayes Ck Pond, O1

-13.6601

131.4002

1

2008

12

0.0

Hayes Creek, 50

-13.5692

131.4817

2

2007–2008

6

0.0

Humpty Doo

-12.5840

131.1260

1

2008

25

0.0

Katherine Gorge campground

-14.3163

132.4211

1

2007

3

0.0

katherine Town

-14.4667

132.2667

1

2007

2

50.0

King River, 128B

-14.6219

132.5956

1

2007

5

100.0

Leaning Tree Lagoon

-12.7140

131.4200

1

2008

26

23.1

Limestone Creek dam, 41

-14.8122

131.9183

1

2007

5

80.0

Mackay

-21.1333

149.1833

2

1991

25

24.0

Manton Dam, 52

-12.8769

131.1408

1

2007

5

0.0

Mareeba

-16.9833

145.5167

1

1991

8

25.0

Mary R Station Acess Road Dam, KH2

-13.6747

131.9734

1

2008

10

10.0

Mary River Roadhouse, KH3

-13.6037

132.2190

1

2008

10

90.0

Mary River Statio HOmestead, MRS

-13.4863

132.0195

1

2008

10

70.0

Mataranka

-14.9167

133.0667

1

2007

1

100.0

Middle Ck (Liddy Bridge), O7

-13.8098

131.3419

1

2008

5

80.0

Middle Pt

-12.5990

131.3260

23

2005–2008

160

5.6

Mt View Rd

-19.2680

146.7960

4

1989–1990

92

2.2

Normanton

-17.6700

141.0790

1

2006

30

93.3

Palmerston

-12.4810

130.9840

1

2008

30

0.0

Paluma

-19.000

146.2000

2

1989–1990

2

0.0

Pine Ck, 49

-13.8186

131.8261

5

2007–2008

23

30.4

Pond on edge of highway, SH1

-13.7294

131.7179

1

2008

11

9.1

Port Douglas

-16.4833

145.4500

1

1991

11

100.0

Sayle Creek, 21c

-14.8928

133.8664

1

2007

5

40.0

Scott Creek, 42

-14.9258

131.8764

1

2007

5

60.0

Dorat Road

-13.4809

131.1780

1

2008

8

25.0

Edith Falls turn-off, 54

-14.1836

132.0358

1

2007

2

100.0

Timber Creek

-15.6460

130.4770

2

2006–2008

25

8.0

Tipperary Homestead, TIPPY

-13.7348

131.0437

1

2008

15

93.3

Townsville

-19.2600

146.8170

2

2006

31

54.8

Tully

-17.9310

145.9240

1

2006

17

64.7

Yungaburra

-17.2667

145.5833

1

1989

10

0.0

 

 

   FIG. A1. At equilibrium, the choice of cell-size and carrying capacity can affect parasite persistence. To test our model and to provide baseline simulations for comparison with scenarios entailing range-expansion, we ran numerous simulations with the population at spatial equilibrium. We ran equilibrium simulations (with ten replicates each over fifty generations) for all combinations of global carrying capacity Kglobal= 8000, 16000, 24000, 32000; grid-cell size = 2, 4, 5, 10 units; and global (frequency independent) transmission rates T = 0.1, 0.2, …, 0.9. Ideally, we wanted a grid-cell size that was small relative to the scale of dispersal, but large enough to accommodate a sufficient number of individuals that parasite prevalence was maintained at the transmission rate at equilibrium. Large carrying-capacity simulations also carry a computational cost (they are slow to run), so we searched for the smallest grid-cell size that gave us stable parasite populations over a wide range of transmission rates at equlibrium, but which was computationally tractable. At a constant dispersal scale, the cell size and carrying capacity we chose had a strong effect on parasite persistence. Carrying capacities below 32000 tended to result in parasite extinction, particularly at low transmission rates, unless cell size was large (ten units). This figure shows observed prevalence versus transmission rate at equilibrium for global carrying capacity K=32000. Cell sizes vary as per the legend. Lines are drawn through mean values from ten simulations. We chose this carrying capacity and a cell size of five units for all following simulations, because this combination allowed parasite persistence across a wide range of transmission rates at spatial equilibrium, but had a cell size only one-third of the maximum dispersal distance.


 

   FIG. A2. The lag between host and parasite with density dependent transmission under different values of r and parasite cost. Note, for r = 3, the spatial extent was increased to 300, as the lag became greater than the spatial extent (200) used elsewhere. In all panels error bars (1 x standard deviation across 20 replicate runs) are provided for only one of the series. Truncated series in the lower panels occur where the lag exceeded the spatial extent of simulation.


 

   FIG. A3. The lag between host and parasite with density independent transmission under different values of r and parasite cost. In each panel, results are from twenty replicate simulations at each level and error bars represent ± 1 x standard deviation across replicate simulations.


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